William Emmanuel S. Yu, AteneoCNG
CNG Logo
 
General
WYU Home
WYU Blog
CNG Home

Resources
Software
Mirrors
Imperial Equation

Contact
Helpdesk
 

AMC 153 (First Semester, 2005-2006)

This is the website for the class "Parallel and Distributed Computing".


Annoucements

  • First Day of Classes on Tuesday, 14 Jun 2003, 3:00PM


Lecture Notes

Penguin Power: Linux and Commodity Parallel Computing [PDF]
Introduction to GNU Development Tools [PDF]
Building the AGILA HPCS [PDF]
Using the AGILA HPCS [PDF]
Parallel Programming with MPI: Basics [PDF]
Parallel Programming with MPI: Point to Point Communications [PDF]
Parallel Programming with MPI: Collective Communications [PDF]
Parallel Programming with MPI: Non-blocking Communications [PDF]
Parallel Programming with MPI: Persistent Communications [PDF]
Wilkinson's Book Slides [HTML]
C Programming Slide by Andrew Vizcarra [PDF] updated 11/10/2001
Short Sample Programs available now [DIR]


Resources

AGILA High Performance Computing System User's Manual [PDF] [HTML]
Putty SSH Client for Win32 [EXE]
PSCP SCP Client for Win32 [EXE]
PSFTP SCP Client for Win32 [EXE]
GUI-based SCP Client for Win32 [EXE]
MS Windows-based MPI Software [HTML]


Documentation for Programs Available in the AGILA HPCS

Message Passing Interface
LAM-MPI Primer [PDF]
MPI Quick Reference [PDF]
MPI Java Bindings [PDF]

Groups, Algorithms and Programming
GAP Reference Guide [PDF]
GAP Tutorial [PDF]
Parallel GAP Manual [PDF]

Parallel Extensible Toolkit for Scientific Computing
PETSc Manual [PDF]

Fifth Generation Mesoscale Model (MM5)
MM5 Tutorial [HTML]
MM5 Source Code Documentation [HTML]
MM5 Model Description Documentation [HTML]
Terrain Preprocessor Documentation [HTML]
DGRAW Documentation [HTML]

NWCHEM High Performance Computational Chemistry Software
NWCHEM Users' Guide [PDF]
NWCHEM Programmers' Guide Part I [PS]
NWCHEM Programmers' Guide Part II [PS]

NAMD Scalable Molecular Dynamics
NAMD Users' Guide [HTML]


Cluster Building References

Parallel Processing HOWTO [HTML] [PDF]
Beowulf HOWTO [HTML] [PDF]
Cluster HOWTO [HTML] [PDF]
 
Google
It's hip2b2
Mobile, Security, Web 2.0, Pipe Dreams and More
Pre-Final Grades for CS 154/CS 262 SY 2009-2010
Botan, the C++ Crypto Library, built for Fedora 12 with Python Bindings Enabled
Barry, the Blackberry Sync Tool, Built for Fedora 12
Apple iSlate: Game Changer?
Philippine-based All Skype Call Center
JPype 0.5.4 RPM Packages for Fedora 11
Sympy 0.6.5 RPM Packages for Fedora 11
Pre-Final Grades for CS 262 SY 2008-2009
First flow-tools update in nearly three (3) years!
iPhone 3G Unlock is available … now!

Slashdot
News for nerds, stuff that matters
Firmware Hack Allows Video Analysis On a Canon Camera
Android 2.1 Finally Makes It To Droid
The Movie Studios' Big 3D Scam
Aussie Gamers Dress As Zombies To Raise R18+ Awareness
Cisco's New Router — Trouble For Hollywood
Planck Mission Releases Images of Galactic Dust
The Death of the US-Mexico Virtual Fence
ACLU Sues Over Legality of "Targeted Killing" By Drones
Scientists Demonstrate Mammalian Tissue Regeneration
Is Microsoft About To Declare Patent War On Linux?
Toshiba Ends Incandescent Bulb Production After 120 Years
Facebook Attracting More Visitors Than Google.com
How Students Use Wikipedia
The Problems With Video Game Voice Acting
The Bloodhound Will Stay On the Ground At 1,000 mph


Stuff
v7ndotcom elursrebmem
It's hip2b2
RedHat
Valid HTML 4.01!
 
For any Questions, Comments or Suggestions
please email me at wyu at ateneo dot edu

Academic and Course Website (Release 3.2)
© 2001-2005, William Emmanuel S. Yu